CDS

Accession Number TCMCG017C28674
gbkey CDS
Protein Id OMO65377.1
Location join(25151..25305,25540..25703,26134..26257,26359..26491,26810..26877,27026..29621,29739..29843,30391..30498,30600..30650)
Organism Corchorus olitorius
locus_tag COLO4_31295

Protein

Length 1167aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01020836.1
Definition protein SCAR3-like protein [Corchorus olitorius]
Locus_tag COLO4_31295

EGGNOG-MAPPER Annotation

COG_category S
Description isoform X1
KEGG_TC -
KEGG_Module M00168        [VIEW IN KEGG]
M00170        [VIEW IN KEGG]
M00171        [VIEW IN KEGG]
M00172        [VIEW IN KEGG]
M00173        [VIEW IN KEGG]
M00346        [VIEW IN KEGG]
M00374        [VIEW IN KEGG]
KEGG_Reaction R00345        [VIEW IN KEGG]
KEGG_rclass RC02741        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01595        [VIEW IN KEGG]
EC 4.1.1.31        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00620        [VIEW IN KEGG]
ko00680        [VIEW IN KEGG]
ko00710        [VIEW IN KEGG]
ko00720        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
map00620        [VIEW IN KEGG]
map00680        [VIEW IN KEGG]
map00710        [VIEW IN KEGG]
map00720        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003779        [VIEW IN EMBL-EBI]
GO:0003785        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0008064        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0030832        [VIEW IN EMBL-EBI]
GO:0030833        [VIEW IN EMBL-EBI]
GO:0030838        [VIEW IN EMBL-EBI]
GO:0031209        [VIEW IN EMBL-EBI]
GO:0031334        [VIEW IN EMBL-EBI]
GO:0032271        [VIEW IN EMBL-EBI]
GO:0032273        [VIEW IN EMBL-EBI]
GO:0032535        [VIEW IN EMBL-EBI]
GO:0032956        [VIEW IN EMBL-EBI]
GO:0032970        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044089        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051125        [VIEW IN EMBL-EBI]
GO:0051127        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051495        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090066        [VIEW IN EMBL-EBI]
GO:0110053        [VIEW IN EMBL-EBI]
GO:1902903        [VIEW IN EMBL-EBI]
GO:1902905        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCTCTGGTTAGAGCTGAGGTGAGGAATGAGTACGGGCTTGGTCAACCGGAGCTTTATAAGCAAGTTAATAGAGAAGATCCTAAAGCGGTTCTCGACGGCGTCGCCGTCGCCGGTCTCGTCGGGATCCTGCGTCAGTTAGGCGATCTTGCTGAATTTGCAGCGGAGGTTTTTCATGGATTACAAGAGCAAGTAATGAGCACAGCTTCTAGAAGTCATAAACTGACGATTCGAGTGAAACGGATTGAAGCTGCGCTTCCGCCACTTGAAAAGGCTGTCCTTGCCCAAACAAGTCATATACACTTTGCTTACACAGCTGGATCTGAATGGCACCCTCGGATTCGCAATGAAAAAAATCATTTCATCTACAATGACTTGCCACGATTTATTATGGATTCCTATGAAGTTTGTCGTGACCCTCCACGTCTTCACTTGCTTGACAAATTCGATGTTGGTGGCCCAGGATCTTGTTTGAAGAGATATTCAGATCCGACTTACTTTAAGAGAGCATCAGGTAGCTGCATTGAAGAAGATGCTGAGAAAGTTCCTAGAGATAAGAAGAGTCGTAAAAGCAAGAAAAGAAGATCGTCGCACAGGAATGGCGAACTGTCACGTGGTCCATCATTATCAAATCGTAGTGGCAGAATGCAGTTTACTTCTCCGATTGGTAATGGGCGAACTTCTTCCTCTCATACTGCATCTACAGTTGACATGGCACTTAAATCTGATACTGGAGAGCGTTCAAATTCTTTTGATTCAAGAACTGGGTCTGGATATATCGAATGTGTTTTCAATCAAGGTTCATCCAGGCTACCTGAGGAAGATGAAGCCAAGGAAGTGTCTTCTAGGTTGATGCAAGAAACAGATACCCTTGGTTCAGATTTTTCATATGAACCAACTCAGGTTGTAGATGATCACTTCTCACATAGTTCATCTCAAGAGCAGATTGCCCCAAGTTCATCTTGTGTGACATGGGATGAAAAGGCAGAAATAGTGGAGTCCAAAGGAGGAAATGTCGATAGAGATAGAGTTCCAGAGATGAACTTTGATGTACATGTGCAGGAACCTGGAGCTTCCGATCTTGGAAATGGTTACCAAATAAATAATCCCTTTAATGACATTGACTCTCCTCAATTAACCTCTATTCAGGACCAGAATGATGAAATTGAAAGTGAGCCGGACAATTATATGGATGCACTGAACACAATAGAATCAGAATCTGAAAATGATATGGAGTGCCATACAAAACGAGAAGTGAAGCAGTGTTGTGAAGATGATGTTGTTGAGTGCCAAACAAAATGGGAAATGCAGCAGAATGATGATGTTAACAATGTTGACCGTGAGAATGGAGAAGACGGAATGCATGTGGTTATGGATGATGATTCAAACCATCATCCATCAATAATTGACTGTTCTGCCTCATCCAATGACATATCAAACAATGAGATGTCCATGAGTTTACACGATCCGGTGCCCTCAGAGAATTTTGCCAGTAAAGAGATGCCTCAAATCTCATGGAAATCTTCTGATCCAGACCATTCACCCAGCACTGATTCATGCACAAGTGATGAAATTCATAATGGTTCACAATTGGAATCTGTCATCACTGATCCCACATCATCTGCTGGCTCCACAGTTTCAGACCATCATCCATCAATAATTGATAGTTCTGCCTCATCCAATGTCATTTCAAACAATGGGACGTCCACAATACTTGATCCAGTGCCCTCAGAGAAATTTGCCAGTGATTGTATGCAGGATCCAGTACATGATAAGATCTTAAACAGTGTTAGTGAATCTCAAAACTCCCAGACTGAACTTTCTAGTGTGCATTCAGTTGGGTTCTGGACAAATGGTGGTCTTTTGGGACTTCAGCCATCAAAACCTCCTGATTTTGCTGCATCAGCTACAGCTCAGAGTTCTGCAACCAAAAGTAGTGAAGCATTTGGTCCTCCAGATCAAACTCTTATGCCTATGCATGATGGACCCAAAGGGAATTCGGGTACACCGGTTGAGAATGCGGGAAGTGCTGAGAAGGTTCCAGTTTCATGTAGCGAGAAAACTTCCCTTCCAACAGCGGATTTAGATGCTGACCTTGAAAAACCTGCTAATTCTCATCGTAATATTAGTCTTGATAGTTTTAATGGTGGTTTGAGCATAAACACTTCATTGCCACAGGGAAAGAAGCACCCTGTCCGTCCTAATATTAAAGCTACGTCTATTGAATCTGATGAGGAGAATGATGACAACTCATCTAGGATGTTTGGACTTGGCCATAAGTTGCTTGTAAATGGTTTTCGAAGAAAGGTGTCAATTACCCATGATGGTGAAGCTGAACCAGCCTCTTCTATGAAATCCGGGTTATTGGAGCAGAGGAATGGGCACCAGACTATATCAAATCAGAAACTTCCTTGGACAGCCTTCAATGAGCAGATTGGAAATGGATCTCCTGAAAATTCACTTACCTCTTCTCCACCACTTGAACATATGAAAATATCTTTCAACCCTATAGATGGAATTGAGACTTCTAAACTCAGATTGCAATTTCCTGATGGGAATCATTATCAGGAAAGCGTGAGGGACATGTTTCCTTCTTTTCAGCTGGTGCCAGGGCCTGCTGTTCCAATGCATAATGTTGCTTCAGACTCTGATGATGATACTTTCTGCAGATCATCTCCTTGTATGTCGGATGATTGCCTTAGTCAGTGCTCTGAGTCAAATTCTGAGCAGTGGGAATCCAGCGGAACCCCTGAAAGCAAGGACCCTGAGCTATATGATGCATTAAGCAGATTGTCATCTATGGATTCTGTTTCAAGCTCTTTACAAGTCGGGGAAGCAGCCTATAATGGGGCCCATGTTAATGGGGAACATAAGACTGTAGTTCCTGGAACTGGTGCAGAACCATCTCTTCCTGTATCACTTGATCTCCCAAGTTTTGATGCCATCAACCCATTAGTACAGGATGAAACAAAAAGCAATTCTGATCAGAAGAACCAGCCAGAATTGCAAAATTCTGCAGAGGTCACACCATTGCCGCCACCCCCTCCTCCTGCACAATGGCGGGTTTCAAAACCTGCTTTGGTGGAGGCCGAAGAAAGACAACATGCTTTATCAGAGTCTCTGAGACATGAACTTGATCTGAGGCTTTTAGGATCAACCGTCTCTCCTAAGCCTAAGCCACCCTCAGCTAATCAACAACAAATTAATGATGAGGCAATTGCATTAAAACCTGAGAAGAAGCATATGGAGAAAGTGCATTTCAATCGGCAGAAAGAGGCTAACCAACTCAGTAGTGGCAGGGGGATGGATGAAAAGGAGGATTTCTTGCATCAGATAAGAACTAAATCTTTCAACCTAAGACCCACAGTCACAGCAAAACCAACTGTTACTTCTGGTCCCACCACCAACGTCAAAGTAACCGCAATTTTGCAGAAAGCCAGTGCAATCCGCCAGGCTGTTGGGAGTGATGACGGCGAAGATGATGATAACTGGAGTGACACTTAA
Protein:  
MPLVRAEVRNEYGLGQPELYKQVNREDPKAVLDGVAVAGLVGILRQLGDLAEFAAEVFHGLQEQVMSTASRSHKLTIRVKRIEAALPPLEKAVLAQTSHIHFAYTAGSEWHPRIRNEKNHFIYNDLPRFIMDSYEVCRDPPRLHLLDKFDVGGPGSCLKRYSDPTYFKRASGSCIEEDAEKVPRDKKSRKSKKRRSSHRNGELSRGPSLSNRSGRMQFTSPIGNGRTSSSHTASTVDMALKSDTGERSNSFDSRTGSGYIECVFNQGSSRLPEEDEAKEVSSRLMQETDTLGSDFSYEPTQVVDDHFSHSSSQEQIAPSSSCVTWDEKAEIVESKGGNVDRDRVPEMNFDVHVQEPGASDLGNGYQINNPFNDIDSPQLTSIQDQNDEIESEPDNYMDALNTIESESENDMECHTKREVKQCCEDDVVECQTKWEMQQNDDVNNVDRENGEDGMHVVMDDDSNHHPSIIDCSASSNDISNNEMSMSLHDPVPSENFASKEMPQISWKSSDPDHSPSTDSCTSDEIHNGSQLESVITDPTSSAGSTVSDHHPSIIDSSASSNVISNNGTSTILDPVPSEKFASDCMQDPVHDKILNSVSESQNSQTELSSVHSVGFWTNGGLLGLQPSKPPDFAASATAQSSATKSSEAFGPPDQTLMPMHDGPKGNSGTPVENAGSAEKVPVSCSEKTSLPTADLDADLEKPANSHRNISLDSFNGGLSINTSLPQGKKHPVRPNIKATSIESDEENDDNSSRMFGLGHKLLVNGFRRKVSITHDGEAEPASSMKSGLLEQRNGHQTISNQKLPWTAFNEQIGNGSPENSLTSSPPLEHMKISFNPIDGIETSKLRLQFPDGNHYQESVRDMFPSFQLVPGPAVPMHNVASDSDDDTFCRSSPCMSDDCLSQCSESNSEQWESSGTPESKDPELYDALSRLSSMDSVSSSLQVGEAAYNGAHVNGEHKTVVPGTGAEPSLPVSLDLPSFDAINPLVQDETKSNSDQKNQPELQNSAEVTPLPPPPPPAQWRVSKPALVEAEERQHALSESLRHELDLRLLGSTVSPKPKPPSANQQQINDEAIALKPEKKHMEKVHFNRQKEANQLSSGRGMDEKEDFLHQIRTKSFNLRPTVTAKPTVTSGPTTNVKVTAILQKASAIRQAVGSDDGEDDDNWSDT